HCSD

New research:Secretome analysis of lipid induced insulin resistance in skeletal muscle cells by a combined experimental and bioinformatics workflow AS Deshmukh, J Cox, LJ Jensen, F Meissner, M Mann - Journal of Proteome , 2015

Support improving HCSD by citing us in your research. Amir Feizi, Amir Banaei-Esfahani, and Jens Nielsen. HCSD: the human cancer secretome database. Database 2015: bav051 doi:10.1093/database/bav051 published online June 14, 2015

Welcome to the HCSD (Human Cancer Secretome Database)

The HCSD is designed to:

  • provide a straightforward searchable depository for published data on different types of human cancer secretome.
  • compare information across different proteome measurements.
  • provide annotation; cross-references in both gene and protein level for each data points.
  • predict and visualize the secretory features for each protein.
  • Searching the database

    In order to query the HCSD,go to the QUERY menu:

    Start with quick search of data tables for label-free or label-based measurments. The tables are interactive and it is possible to sort and filter based on the information in the columns.

    In case, you have a specific gene of the interest in mind or you get one from quick search, advanced search allows you to get more details for your target protein quantification in various cancer types and studies.Beside, you will get information such as annotation,cross references, experimental design, validation, and secretory features.

    About the database

    Release history:
    Version: 1.0
    HCSD updated: 2015-05-14
    87649 mesurments
    21 label-free study
    14 label-based study
    73 tissue and cell line samples.
    7001 genes

    Citing HCSD

    Amir Feizi, Amir Banaei-Esfahani, and Jens Nielsen. HCSD: the human cancer secretome database. Database 2015: bav051 doi:10.1093/database/bav051 published online June 14, 2015